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Government Of India has identified 12 institutions which are actively managing patients suffering from rare diseases. These institutes have been designated as Centres of Excellences (CoE)
- All India Institute of Medical Sciences, New Delhi
- Maulana Azad Medical College (MAMC), New Delhi
- Sanjay Gandhi Postgraduate Institute of Medical Sciences, Lucknow
- Postgraduate Institute of Medical Education and Research (PGIMER), Chandigarh
- The Center for DNA Fingerprinting & Diagnostics is an Indian Biotechnology research center, Telangana
- King Edward (VII) Memorial Hospital, Mumbai
- Institute of post graduate medical education and research, Kolkata
- The Centre for Human Genetics (CHG) and Indira Gandhi Hospital, Bangalore
- All India Institute of Medical Sciences, Jodhpur
- The Institute of Child Health, Chennai
- The Government Medical College, Thiruvananthapuram
- All India Institute of Medical Sciences, Bhopal